Beta-arrestin-1 - GPR33 complex model

GPCR CLASS (FAMILY)

A (Rhodopsin)

SPECIES

Homo sapiens

ARRESTIN FAMILY

Beta

DATE

2025-02-19

3D VIEW

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Tertiary structure confidence

Chain pLDDT score avg
GPR33 85.6
Beta-arrestin-1 82.7
Very high (>90)
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered

PTM Score: 0.8
iPTM Score: 0.7
PAE mean: 14.9


GPCR - Arrestin interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (arrestin residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction definitions:

Residue numbering:

GPCR-Arrestin backbone (bb) or sidechain (sc):





Structures

Sequence Color

Arrestin, GPCR
Interaction cut-off: strict (stick), loose (line)

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Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Arrestin
segment
AA
Number		 Generic
number
Hydrophobic ICL2 Q 137 34x54 s17s18 R 285 C.s17s18.11
Van-der-waals ICL2 Q 137 34x54 s17s18 R 285 C.s17s18.11
Hydrophobic ICL2 P 133 34x50 S16 A 247 C.S16.01
Hydrophobic ICL3 L 237 - s15s16 F 244 C.s15s16.03
Van-der-waals ICL3 L 237 - s15s16 F 244 C.s15s16.03
Hydrophobic TM3 L 129 3x53 s5s6 R 65 N.s5s6.02
Van-der-waals TM3 L 129 3x53 s5s6 R 65 N.s5s6.02
Hydrophobic TM6 M 247 6x37 s5s6 L 71 N.s5s6.08
Polar H8 G 303 8x47 s5s6 D 69 N.s5s6.06
Hydrophobic H8 G 303 8x47 s5s6 D 69 N.s5s6.06
Van-der-waals H8 G 303 8x47 s5s6 D 69 N.s5s6.06
Hydrophobic TM6 P 243 6x33 s5s6 L 71 N.s5s6.08
Van-der-waals TM6 P 243 6x33 s5s6 L 71 N.s5s6.08
Polar H8 E 304 8x48 s5s6 D 69 N.s5s6.06
Hydrophobic H8 E 304 8x48 s5s6 D 69 N.s5s6.06
Van-der-waals H8 E 304 8x48 s5s6 D 69 N.s5s6.06
Hydrophobic TM3 L 129 3x53 s5s6 D 67 N.s5s6.04
Van-der-waals TM3 L 129 3x53 s5s6 D 67 N.s5s6.04
Hydrophobic TM7 V 302 7x56 s5s6 V 70 N.s5s6.07
Van-der-waals TM7 V 302 7x56 s5s6 V 70 N.s5s6.07
Hydrophobic ICL3 L 237 - S6 F 75 N.S6.01
Van-der-waals ICL3 L 237 - S6 F 75 N.S6.01
Hydrophobic TM5 V 228 5x61 s5s6 L 71 N.s5s6.08
Polar H8 N 305 8x49 s20c E 404 C.s20c.14
Hydrophobic TM6 V 246 6x36 s5s6 L 71 N.s5s6.08
Hydrophobic TM6 P 243 6x33 s5s6 L 73 N.s5s6.10
Van-der-waals TM6 P 243 6x33 s5s6 L 73 N.s5s6.10
Polar TM5 R 235 5x68 s15s16 F 244 C.s15s16.03
Hydrophobic TM5 R 235 5x68 s15s16 F 244 C.s15s16.03
Van-der-waals TM5 R 235 5x68 s15s16 F 244 C.s15s16.03
Polar TM5 R 235 5x68 s15s16 T 246 C.s15s16.05
Hydrophobic TM5 R 235 5x68 s15s16 T 246 C.s15s16.05
Van-der-waals TM5 R 235 5x68 s15s16 T 246 C.s15s16.05
Polar H8 N 305 8x49 s5s6 D 69 N.s5s6.06
Van-der-waals H8 N 305 8x49 s5s6 D 69 N.s5s6.06
Hydrophobic TM6 P 243 6x33 s5s6 G 72 N.s5s6.09
Hydrophobic TM7 V 302 7x56 s5s6 L 71 N.s5s6.08
Polar ICL1 K 59 - s8s9 P 133 N.s8s9.04
Van-der-waals ICL1 K 59 - s8s9 P 133 N.s8s9.04
Hydrophobic TM2 F 67 2x43 s5s6 V 70 N.s5s6.07
Van-der-waals TM2 F 67 2x43 s5s6 V 70 N.s5s6.07
Polar ICL2 P 133 34x50 s5s6 R 65 N.s5s6.02
Hydrophobic ICL2 P 133 34x50 s5s6 R 65 N.s5s6.02
Van-der-waals ICL2 P 133 34x50 s5s6 R 65 N.s5s6.02
Hydrophobic ICL2 V 134 34x51 S16 A 247 C.S16.01
Van-der-waals ICL2 V 134 34x51 S16 A 247 C.S16.01
Hydrophobic TM5 Y 225 5x58 s5s6 L 71 N.s5s6.08
Hydrophobic ICL2 P 133 34x50 s15s16 N 245 C.s15s16.04
Van-der-waals ICL2 P 133 34x50 s15s16 N 245 C.s15s16.04
Polar H8 N 305 8x49 s5s6 E 66 N.s5s6.03
Hydrophobic H8 N 305 8x49 s5s6 E 66 N.s5s6.03
Van-der-waals H8 N 305 8x49 s5s6 E 66 N.s5s6.03
Hydrophobic ICL1 K 59 - s8s9 E 134 N.s8s9.05
Hydrophobic ICL2 V 134 34x51 S16 Q 248 C.S16.02
Hydrophobic TM2 N 63 2x39 s5s6 V 70 N.s5s6.07
Ionic ICL2 R 140 34x57 s5s6 D 67 N.s5s6.04
Polar ICL2 R 140 34x57 s5s6 D 67 N.s5s6.04
Hydrophobic ICL2 R 140 34x57 s5s6 D 67 N.s5s6.04
Van-der-waals ICL2 R 140 34x57 s5s6 D 67 N.s5s6.04
Polar TM3 T 130 3x54 s15s16 N 245 C.s15s16.04
Van-der-waals TM3 T 130 3x54 s15s16 N 245 C.s15s16.04
Polar ICL2 Q 137 34x54 s5s6 R 65 N.s5s6.02
Hydrophobic ICL2 Q 137 34x54 s5s6 R 65 N.s5s6.02
Van-der-waals ICL2 Q 137 34x54 s5s6 R 65 N.s5s6.02
Hydrophobic TM4 T 141 4x38 s17s18 R 285 C.s17s18.11
Hydrophobic TM5 V 232 5x65 s5s6 L 73 N.s5s6.10
Van-der-waals TM5 V 232 5x65 s5s6 L 73 N.s5s6.10
Polar ICL2 V 134 34x51 S16 Y 249 C.S16.03
Hydrophobic ICL2 V 134 34x51 S16 Y 249 C.S16.03
Hydrophobic H8 V 309 8x53 s20c E 404 C.s20c.14
Van-der-waals H8 V 309 8x53 s20c E 404 C.s20c.14
Polar ICL2 Q 137 34x54 s8s9 Q 130 N.s8s9.01
Van-der-waals ICL2 Q 137 34x54 s8s9 Q 130 N.s8s9.01
Hydrophobic TM6 K 242 6x32 s5s6 G 72 N.s5s6.09
Hydrophobic TM7 V 302 7x56 s5s6 G 72 N.s5s6.09
Hydrophobic TM3 L 129 3x53 s5s6 L 68 N.s5s6.05
Van-der-waals TM3 L 129 3x53 s5s6 L 68 N.s5s6.05
Polar TM3 R 126 3x50 s5s6 V 70 N.s5s6.07
Hydrophobic TM3 R 126 3x50 s5s6 V 70 N.s5s6.07
Van-der-waals TM3 R 126 3x50 s5s6 V 70 N.s5s6.07
Polar ICL2 P 133 34x50 S16 Y 249 C.S16.03
Hydrophobic TM3 R 126 3x50 s5s6 L 71 N.s5s6.08
Hydrophobic ICL2 Q 137 34x54 s17s18 G 286 C.s17s18.12
Van-der-waals ICL2 Q 137 34x54 s17s18 G 286 C.s17s18.12
Ionic TM6 K 242 6x32 s5s6 D 69 N.s5s6.06
Hydrophobic ICL1 K 59 - s8s9 T 136 N.s8s9.07
Van-der-waals ICL1 K 59 - s8s9 T 136 N.s8s9.07
Hydrophobic TM4 P 142 4x39 s8s9 E 134 N.s8s9.05
Van-der-waals TM4 P 142 4x39 s8s9 E 134 N.s8s9.05
Polar ICL2 Q 137 34x54 S16 Y 249 C.S16.03
Hydrophobic ICL2 Q 137 34x54 S16 Y 249 C.S16.03
Van-der-waals ICL2 Q 137 34x54 S16 Y 249 C.S16.03
Polar TM2 N 63 2x39 s5s6 D 67 N.s5s6.04
Hydrophobic TM2 N 63 2x39 s5s6 D 67 N.s5s6.04
Van-der-waals TM2 N 63 2x39 s5s6 D 67 N.s5s6.04
Ionic H8 K 312 8x56 s20c E 407 C.s20c.17
Polar H8 K 312 8x56 s20c E 407 C.s20c.17
Hydrophobic H8 K 312 8x56 s20c E 407 C.s20c.17
Van-der-waals H8 K 312 8x56 s20c E 407 C.s20c.17