Beta-arrestin-1 - FP receptor complex model

GPCR CLASS (FAMILY)

A (Rhodopsin)

SPECIES

Homo sapiens

ARRESTIN FAMILY

Beta

DATE

2025-02-19

3D VIEW

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Tertiary structure confidence

Chain pLDDT score avg
FP 76.7
Beta-arrestin-1 78.7
Very high (>90)
Confident (90-70)
Low (70-50)
Very low (<50)
Disordered

PTM Score: 0.6
iPTM Score: 0.4
PAE mean: 20.6


GPCR - Arrestin interface interactions



The biflare plot is a modified version of a flareplot, where lines are drawn between an inner concentric circle (arrestin residues) and an outer concentric circle (GPCR residues) depicting the interface interactions.
Different interaction types are shown with different line types (aromatic - solid, hydrophobic - dashed, ionic - long dashed, polar - dotted, Van der Waals - dash-dot).
The interactive features include filtering on interaction type, segments, residues and backbone or sidechain interactions.


Interaction definitions:

Residue numbering:

GPCR-Arrestin backbone (bb) or sidechain (sc):





Structures

Sequence Color

Arrestin, GPCR
Interaction cut-off: strict (stick), loose (line)

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Interaction
type		 GPCR
Segment
AA
Number		 Generic
number		 Arrestin
segment
AA
Number		 Generic
number
Ionic TM1 R 57 1x63 s20c E 407 C.s20c.17
Polar TM1 R 57 1x63 s20c E 407 C.s20c.17
Van-der-waals TM1 R 57 1x63 s20c E 407 C.s20c.17
Hydrophobic TM6 M 247 6x33 s5s6 L 73 N.s5s6.10
Van-der-waals TM6 M 247 6x33 s5s6 L 73 N.s5s6.10
Polar ICL3 R 238 - S6 D 78 N.S6.04
Hydrophobic ICL3 R 238 - S6 D 78 N.S6.04
Van-der-waals ICL3 R 238 - S6 D 78 N.S6.04
Hydrophobic TM6 M 247 6x33 s5s6 L 71 N.s5s6.08
Hydrophobic TM5 V 230 5x66 S6 F 75 N.S6.01
Van-der-waals TM5 V 230 5x66 S6 F 75 N.S6.01
Polar TM3 I 135 3x52 s5s6 R 65 N.s5s6.02
Hydrophobic TM3 I 135 3x52 s5s6 R 65 N.s5s6.02
Van-der-waals TM3 I 135 3x52 s5s6 R 65 N.s5s6.02
Polar ICL2 T 145 34x55 s8s9 D 135 N.s8s9.06
Hydrophobic ICL2 T 145 34x55 S16 Y 249 C.S16.03
Polar ICL1 S 62 - s5s6 E 66 N.s5s6.03
Hydrophobic ICL1 S 62 - s5s6 E 66 N.s5s6.03
Van-der-waals ICL1 S 62 - s5s6 E 66 N.s5s6.03
Polar TM3 T 138 3x55 s15s16 N 245 C.s15s16.04
Hydrophobic TM3 T 138 3x55 s15s16 N 245 C.s15s16.04
Van-der-waals TM3 T 138 3x55 s15s16 N 245 C.s15s16.04
Ionic C-term E 334 - s9s10 K 157 N.s9s10.09
Polar C-term E 334 - s9s10 K 157 N.s9s10.09
Hydrophobic C-term E 334 - s9s10 K 157 N.s9s10.09
Van-der-waals C-term E 334 - s9s10 K 157 N.s9s10.09
Polar ICL1 S 62 - s5s6 D 67 N.s5s6.04
Polar TM3 G 136 3x53 s5s6 R 65 N.s5s6.02
Hydrophobic TM3 G 136 3x53 s5s6 R 65 N.s5s6.02
Van-der-waals TM3 G 136 3x53 s5s6 R 65 N.s5s6.02
Hydrophobic TM3 K 139 3x56 s15s16 N 245 C.s15s16.04
Van-der-waals TM3 K 139 3x56 s15s16 N 245 C.s15s16.04
Polar TM3 K 139 3x56 s5s6 R 65 N.s5s6.02
Hydrophobic TM3 K 139 3x56 s5s6 R 65 N.s5s6.02
Van-der-waals TM3 K 139 3x56 s5s6 R 65 N.s5s6.02
Hydrophobic TM6 H 243 6x29 s5s6 L 73 N.s5s6.10
Van-der-waals TM6 H 243 6x29 s5s6 L 73 N.s5s6.10
Van-der-waals ICL2 S 144 34x54 s5s6 R 65 N.s5s6.02
Polar ICL1 K 63 - s5s6 E 66 N.s5s6.03
Hydrophobic ICL1 K 63 - s5s6 E 66 N.s5s6.03
Van-der-waals ICL1 K 63 - s5s6 E 66 N.s5s6.03
Polar TM6 H 243 6x29 s5s6 G 72 N.s5s6.09
Van-der-waals TM6 H 243 6x29 s5s6 G 72 N.s5s6.09
Hydrophobic TM3 G 136 3x53 s5s6 L 68 N.s5s6.05
Polar ICL3 R 238 - S6 K 77 N.S6.03
Hydrophobic ICL3 R 238 - S6 K 77 N.S6.03
Van-der-waals ICL3 R 238 - S6 K 77 N.S6.03
Ionic ICL2 H 143 34x53 s5s6 D 67 N.s5s6.04
Polar ICL2 H 143 34x53 s5s6 D 67 N.s5s6.04
Hydrophobic ICL2 H 143 34x53 s5s6 D 67 N.s5s6.04
Van-der-waals ICL2 H 143 34x53 s5s6 D 67 N.s5s6.04
Hydrophobic ICL2 I 141 34x51 S16 A 247 C.S16.01
Hydrophobic ICL2 P 140 34x50 s15s16 N 245 C.s15s16.04
Van-der-waals ICL2 P 140 34x50 s15s16 N 245 C.s15s16.04
Polar ICL2 H 143 34x53 s5s6 R 65 N.s5s6.02
Aromatic ICL2 H 143 34x53 s5s6 R 65 N.s5s6.02
Hydrophobic ICL2 H 143 34x53 s5s6 R 65 N.s5s6.02
Van-der-waals ICL2 H 143 34x53 s5s6 R 65 N.s5s6.02
Hydrophobic TM3 V 137 3x54 s15s16 F 244 C.s15s16.03
Van-der-waals TM3 V 137 3x54 s15s16 F 244 C.s15s16.03
Polar ICL2 P 140 34x50 S5 Y 63 N.S5.12
Hydrophobic ICL2 P 140 34x50 S5 Y 63 N.S5.12
Van-der-waals ICL2 P 140 34x50 S5 Y 63 N.S5.12
Hydrophobic TM3 R 133 3x50 s5s6 L 71 N.s5s6.08
Van-der-waals TM3 R 133 3x50 s5s6 L 71 N.s5s6.08
Polar ICL2 I 141 34x51 S5 Y 63 N.S5.12
Hydrophobic ICL2 I 141 34x51 S5 Y 63 N.S5.12
Van-der-waals ICL2 I 141 34x51 S5 Y 63 N.S5.12
Hydrophobic TM5 V 230 5x66 s15s16 F 244 C.s15s16.03
Van-der-waals TM5 V 230 5x66 s15s16 F 244 C.s15s16.03
Hydrophobic TM5 L 227 5x63 s15s16 F 244 C.s15s16.03
Polar ICL1 K 61 - s8s9 T 136 N.s8s9.07
Van-der-waals ICL1 K 61 - s8s9 T 136 N.s8s9.07
Van-der-waals TM1 R 57 1x63 s20c E 405 C.s20c.15
Hydrophobic TM2 L 67 2x40 s5s6 V 70 N.s5s6.07
Van-der-waals TM2 L 67 2x40 s5s6 V 70 N.s5s6.07
Hydrophobic TM1 Q 60 1x66 s8s9 T 136 N.s8s9.07
Hydrophobic ICL2 I 141 34x51 S9 C 140 N.S9.01
Hydrophobic ICL2 I 141 34x51 S8 L 129 N.S8.03
Van-der-waals ICL2 I 141 34x51 S8 L 129 N.S8.03
Hydrophobic ICL1 K 63 - s5s6 V 70 N.s5s6.07
Van-der-waals ICL1 K 63 - s5s6 V 70 N.s5s6.07
Polar ICL2 F 142 34x52 S16 Y 249 C.S16.03
Polar ICL1 S 62 - s8s9 T 136 N.s8s9.07
Van-der-waals ICL1 S 62 - s8s9 T 136 N.s8s9.07
Polar ICL2 P 140 34x50 s5s6 R 65 N.s5s6.02
Hydrophobic ICL2 P 140 34x50 s5s6 R 65 N.s5s6.02
Van-der-waals ICL2 P 140 34x50 s5s6 R 65 N.s5s6.02
Ionic TM5 K 233 5x69 s17s18 E 313 C.s17s18.39
Polar TM5 K 233 5x69 s17s18 E 313 C.s17s18.39
Polar ICL2 I 141 34x51 S16 Y 249 C.S16.03
Hydrophobic ICL2 I 141 34x51 S16 Y 249 C.S16.03
Van-der-waals ICL2 I 141 34x51 S16 Y 249 C.S16.03
Hydrophobic TM2 F 66 2x39 s5s6 V 70 N.s5s6.07
Van-der-waals TM2 F 66 2x39 s5s6 V 70 N.s5s6.07
Hydrophobic TM3 V 137 3x54 s5s6 L 68 N.s5s6.05
Van-der-waals TM3 V 137 3x54 s5s6 L 68 N.s5s6.05
Hydrophobic ICL2 S 144 34x54 s8s9 D 135 N.s8s9.06
Van-der-waals ICL2 S 144 34x54 s8s9 D 135 N.s8s9.06
Aromatic TM6 H 244 6x30 S6 F 75 N.S6.01
Hydrophobic TM6 H 244 6x30 S6 F 75 N.S6.01
Van-der-waals TM6 H 244 6x30 S6 F 75 N.S6.01
Polar ICL1 S 62 - s8s9 G 137 N.s8s9.08
Hydrophobic ICL1 S 62 - s8s9 G 137 N.s8s9.08
Van-der-waals ICL1 S 62 - s8s9 G 137 N.s8s9.08
Hydrophobic ICL2 P 140 34x50 s15s16 F 244 C.s15s16.03
Hydrophobic ICL3 R 238 - S6 L 79 N.S6.05
Van-der-waals ICL3 R 238 - S6 L 79 N.S6.05
Hydrophobic TM6 H 244 6x30 s5s6 L 73 N.s5s6.10
Hydrophobic ICL2 I 141 34x51 S15 I 241 C.S15.14
Van-der-waals ICL2 I 141 34x51 S15 I 241 C.S15.14
Polar H8 R 308 8x47 s5s6 V 70 N.s5s6.07
Hydrophobic H8 R 308 8x47 s5s6 V 70 N.s5s6.07
Van-der-waals H8 R 308 8x47 s5s6 V 70 N.s5s6.07
Ionic ICL1 K 63 - s5s6 D 69 N.s5s6.06
Polar ICL1 K 63 - s5s6 D 69 N.s5s6.06
Hydrophobic ICL1 K 63 - s5s6 D 69 N.s5s6.06
Van-der-waals ICL1 K 63 - s5s6 D 69 N.s5s6.06
Hydrophobic TM1 Q 60 1x66 s5s6 E 66 N.s5s6.03
Van-der-waals TM1 Q 60 1x66 s5s6 E 66 N.s5s6.03