Structure information
oxoglutarate receptorPROTEIN CLASS
Class A (Rhodopsin)
PDB CODE
9VMP
SPECIES
Homo sapiens
RESOLUTION
2.500
PREFERRED CHAIN
R
PUBLICATION DATE
March 18, 2026
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Ligand Interaction Browser
Download list in excel| Ligand | Amino Acid | Generic Number | Segment | Interaction Type |
|---|---|---|---|---|
| Ligand | Amino Acid | Generic Number | Segment | Interaction Type |
| A-1 | F113 | 3.32x32 | TM3 | hydrophobic |
| A-1 | H114 | 3.33x33 | TM3 | polar (hydrogen bond) |
| A-1 | H114 | 3.33x33 | TM3 | polar (hydrogen bond) |
| A-1 | M168 | 4.60x61 | TM4 | polar (hydrogen bond) |
| A-1 | I172 | 4.64x65 | TM4 | Van der Waals |
| A-1 | D185 | 45.52x52 | ECL2 | Van der Waals |
| A-1 | L186 | ECL2 | polar (hydrogen bond with backbone) | |
| A-1 | L186 | ECL2 | Van der Waals | |
| A-1 | Y284 | 7.35x34 | TM7 | polar (hydrogen bond) |
| A-1 | Y284 | 7.35x34 | TM7 | polar (hydrogen bond) |
| A-1 | R288 | 7.39x38 | TM7 | polar (charge-assisted hydrogen bond) |
Ligands
A-1
Residue Diagrams
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Residue Table
|
GPCRdb(A)
|
GPCRdb(A)
|
oxoglutarate receptor
|
|---|---|---|
| TM3 | ||
| 3x32 | 3.32x32 | F113 |
| 3x33 | 3.33x33 | H114 |
| TM4 | ||
| 4x61 | 4.60x61 | M168 |
| 4x65 | 4.64x65 | I172 |
| ECL2 | ||
| 45x52 | 45.52x52 | D185 |
| TM7 | ||
| 7x34 | 7.35x34 | Y284 |
| 7x38 | 7.39x38 | R288 |